User contributions for Matt Speir
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16 July 2024
- 16:2916:29, 16 July 2024 diff hist −425 DoBlastzChainNet.pl →The new streamline pairLastz script: tweaking instructions in the "push it to the RR" section to remove confusing dev path an simplify pointer to GenArk pushing instructions. current
27 April 2017
- 17:2617:26, 27 April 2017 diff hist +8 Public Hub Guidelines No edit summary
26 April 2017
25 April 2017
- 15:1715:17, 25 April 2017 diff hist +1 Public Hub Guidelines →Track description page recommendations
- 15:1715:17, 25 April 2017 diff hist +33 Public Hub Guidelines →Track description page recommendations
- 15:1615:16, 25 April 2017 diff hist +3 Public Hub Guidelines →Required Guidelines
- 15:1115:11, 25 April 2017 diff hist +173 Public Hub Guidelines No edit summary
- 14:5114:51, 25 April 2017 diff hist +63 Public Hub Guidelines →Track description page recommendations
24 April 2017
- 22:0422:04, 24 April 2017 diff hist +2,921 Public Hub Guidelines →Public Hub Examples
- 22:0222:02, 24 April 2017 diff hist +1,887 Public Hub Guidelines No edit summary
14 April 2017
- 18:4518:45, 14 April 2017 diff hist +1,456 Public Hub Guidelines No edit summary
30 September 2016
- 19:5019:50, 30 September 2016 diff hist 0 N File:Ashg2016Poster.pdf No edit summary current
- 18:5218:52, 30 September 2016 diff hist −1 Ashg2016Poster →Poster current
- 18:5218:52, 30 September 2016 diff hist −38 Ashg2016Poster →Poster
- 18:5118:51, 30 September 2016 diff hist +309 Ashg2016Poster →Multi-region
19 September 2016
- 21:0021:00, 19 September 2016 diff hist +1,770 N Ashg2016Poster Created page with "This page expands on the UCSC Genome Browser poster presented by Matthew Speir at the [http://www.ashg.org/2016meeting/ ASHG 2016 Annual Meeting 2015] in Vancouver. The poster de..."
7 October 2015
- 22:2422:24, 7 October 2015 diff hist +2 Whole genome alignment howto →Example, step 5: Phastcons
16 June 2015
- 21:3621:36, 16 June 2015 diff hist +142 BioengSymp2015Poster →Data Integrator current
- 21:3421:34, 16 June 2015 diff hist +115 BioengSymp2015Poster →Genome Browser in a Box
- 21:2121:21, 16 June 2015 diff hist +104 N File:BioengSymp2015Poster.pptx (poster on the Data Integrator and GBiB presented at UC-wide Bioengineering Symposium, UCSC, June 2015.) current
- 21:1921:19, 16 June 2015 diff hist +104 N File:BioengSymp2015Poster.pdf (poster on the Data Integrator and GBiB presented at UC-wide Bioengineering Symposium, UCSC, June 2015.) current
- 18:3918:39, 16 June 2015 diff hist +3,858 N BioengSymp2015Poster Created page with "This page expands on the UCSC Genome Browser poster presented by Matthew Speir at [https://bioeng-symposium-2015.soe.ucsc.edu/ UC-wide Bioengineering Symposium 2015] at UCSC. The..."
- 18:1118:11, 16 June 2015 diff hist +335 Presentations →2015
5 May 2015
6 February 2015
- 22:1022:10, 6 February 2015 diff hist +6,594 N HowTo: Syntenic Net or Reciprocal Best Created page with "This page is meant to be a general "How To" for performing a syntenic net, a reciprocal best, or a chain swap procedure. You may be interested in these other pages for more info..."
22 September 2014
- 21:5521:55, 22 September 2014 diff hist 0 Minimal Steps For LiftOver No edit summary
26 March 2014
- 18:0718:07, 26 March 2014 diff hist +201 Other genome browsers →Plant Browsers
13 March 2014
- 16:3916:39, 13 March 2014 diff hist +585 Gene Set Summary Statistics →Top five smallest transcript genes
- 16:2216:22, 13 March 2014 diff hist +600 Gene Set Summary Statistics →Top five largest CDS extent genes
- 16:1116:11, 13 March 2014 diff hist +583 Gene Set Summary Statistics →Top five exon count genes
- 15:5515:55, 13 March 2014 diff hist +129 Gene Set Summary Statistics →summary of intron size statistics
- 15:4515:45, 13 March 2014 diff hist +125 Gene Set Summary Statistics →summary of exon size statistics
- 00:1300:13, 13 March 2014 diff hist +144 Gene Set Summary Statistics →summary of gene and exon counts
- 00:0900:09, 13 March 2014 diff hist +60 Gene Set Summary Statistics →gene sets measured
12 March 2014
- 23:5223:52, 12 March 2014 diff hist +595 Gene Set Summary Statistics →Top five exon count genes
- 23:3723:37, 12 March 2014 diff hist +588 Gene Set Summary Statistics →Top five smallest transcript genes
- 23:1523:15, 12 March 2014 diff hist +609 Gene Set Summary Statistics →Top five largest CDS extent genes
- 22:2422:24, 12 March 2014 diff hist +129 Gene Set Summary Statistics →summary of intron size statistics
- 22:2122:21, 12 March 2014 diff hist +126 Gene Set Summary Statistics →summary of exon size statistics
- 22:1622:16, 12 March 2014 diff hist +145 Gene Set Summary Statistics →summary of gene and exon counts
