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Date Name Thumbnail Size User Description Versions
16:33, 4 August 2020 Hg19.grcIncidentDb.bb (file) 106 KB Hiram gwUploadFile upload 809
16:33, 23 July 2020 Mm9.grcIncidentDb.bb (file) 74 KB Hiram gwUploadFile upload 281
16:33, 23 July 2020 Mm10.grcIncidentDb.bb (file) 77 KB Hiram gwUploadFile upload 285
16:33, 21 April 2020 DanRer11.grcIncidentDb.bb (file) 203 KB Hiram gwUploadFile upload 7
16:33, 21 April 2020 DanRer10.grcIncidentDb.bb (file) 127 KB Hiram gwUploadFile upload 121
18:37, 17 January 2020 2020 PAG UCSC part3.pdf (file) 666 KB Brian Lee   1
18:36, 17 January 2020 2020 PAG UCSC part2.pdf (file) 1.28 MB Brian Lee   1
18:36, 17 January 2020 2020 PAG UCSC part1.pdf (file) 1.45 MB Brian Lee   1
18:32, 17 January 2020 PAG Poster API.pdf (file) 1.2 MB Brian Lee   1
18:31, 17 January 2020 PAG Hubs CyVerse.pdf (file) 1.27 MB Brian Lee   1
22:48, 26 September 2019 ASHG 2019 Interact.pdf (file) 351 KB Brian Lee   1
17:24, 3 September 2019 GalGal6.grcIncidentDb.bb (file) 19 KB Hiram gwUploadFile upload 1
16:33, 14 June 2019 Hg38.grcIncidentDb.bb (file) 236 KB Hiram gwUploadFile upload 344
00:56, 19 May 2019 NationalYoYoMuseum ChicoCA 50.jpg (file) 553 KB Hiram National YO YO Museum, Chico CA 1
23:35, 7 March 2019 UO Hubs.pdf (file) 1.59 MB Brian Lee   1
23:33, 7 March 2019 UO UCSC CustomTracks.pdf (file) 1.07 MB Brian Lee   1
23:31, 7 March 2019 UO UCSC.pdf (file) 1.55 MB Brian Lee   1
23:27, 7 March 2019 PAG Hubs.pdf (file) 1.07 MB Brian Lee   1
17:33, 30 January 2019 GalGal5.grcIncidentDb.bb (file) 27 KB Hiram gwUploadFile upload 7
19:19, 7 January 2019 UCSC PAG 2019 AssemblyHub.pdf (file) 668 KB Brian Lee   2
00:49, 15 November 2018 Browsermap2018.pdf (file) 682 KB Brian Lee   1
18:36, 5 November 2018 InteractTrackEnhanced.pptx (file) 1.8 MB Kate   1
18:35, 5 November 2018 InteractTrackEnhanced.pdf (file) 978 KB Kate   1
21:56, 25 October 2018 UcscLinks.xlsx (file) 13 KB Kuhn changed mm10 links, too. 1
21:46, 25 October 2018 UcscLinks.xls (file) 13 KB Kuhn Updated some links to rsIDs to avoid disamiguity page. 15
21:54, 1 October 2018 AwsAttachVolume.sh.txt (file) 4 KB Hiram Script for AWS instance initialization to attach a data volume to a running instance. Used in the startParaHub.sh script upon starting the machine. 1
17:35, 26 September 2018 OpenStackParaHubSetup.sh.txt (file) 8 KB Hiram reorganize NFS setups, parameterize the installation directory 5
17:10, 26 September 2018 InitParasol.sh.txt (file) 3 KB Hiram less restrictive subnet specification and separate hub/node logs in ./logs/ directory 3
20:32, 25 September 2018 NodeReport.sh.txt (file) 1 KB Hiram add usage message and directory argument for result file 4
07:41, 1 September 2018 BlatBot pl.txt (file) 5 KB Galt changed cse to soe 4
18:00, 20 August 2018 InteractTrack.pdf (file) 776 KB Kate   1
17:42, 11 July 2018 OpenStackParaNodeSetup.sh.template.txt (file) 4 KB Hiram correctly fixup /mnt filesystem for broken openstack installation, and mount /mnt/data from the hub 2
18:14, 4 May 2018 OpenStackStartParaNode.sh.txt (file) 7 KB Chmalee added command line argument for ssh key-pair 2
18:13, 4 May 2018 OpenStackStartParaHub.sh.txt (file) 8 KB Chmalee Added command line argument for ssh key-pair name 2
17:09, 28 April 2018 LastzProcessingTimeHistogram.png (file) 53 KB Hiram lastz cluster compute time histogram 1,635 measurements from alignments performed at UCSC 459 measurements are less than 0.05 days (less than 1 hour) due to very small genome sizes 59 measurements are longer than 5 days processing time due to high c... 1
23:13, 27 April 2018 SizeVsTime.png (file) 156 KB Hiram lastz cluster run processing time vs. genome size blue points plot times 2 days or less processing time, left axis scale 0 - 2 days red points plot times over 2 days processing time, right axis scale 0 - 70 days 1
18:39, 24 April 2018 UCSC BoG 2018 GtexPoster.pptx (file) 749 KB Kate   1
18:37, 24 April 2018 UCSC BoG 2018 GtexPoster.pdf (file) 732 KB Kate   1
19:36, 18 April 2018 UcscPostDoc 2018.pptx (file) 1.51 MB Jairo Navarro Powerpoint of the 2018 UCSC Postdoc Symposium made by Jairo Navarro. 1
02:53, 6 April 2018 ParasolInstall.sh.txt (file) 1 KB Hiram adding git fetch of automation scripts into /data/scripts/ 3
17:39, 20 March 2018 CyberDuck CIRM-01.png (file) 53 KB Max   1
18:16, 5 March 2018 UcscPostDoc 2018.pdf (file) 954 KB Jairo Navarro Jairo's poster for the 2018 UCSC Postdoc Symposium (March 1st, 2018) 1
19:48, 19 January 2018 2018 PAG Wed 1 17.pdf (file) 1.05 MB Brian Lee   1
19:46, 19 January 2018 CyVerseAssemblyHubsPAG2018.pdf (file) 1.49 MB Brian Lee   1
19:41, 19 January 2018 AssemblyHubsPAG2018.pdf (file) 917 KB Brian Lee   1
20:41, 6 December 2017 Browsermap2017.pdf (file) 242 KB Brian Lee Jorge Presentation of Browser Layout 1
18:27, 31 October 2017 GenomeInformatics2017.pages (file) 3.82 MB AngieHinrichs Mac Pages (analogous to PPT) file for Genome Informatics 2017 poster on support for HGVS terms in the Genome Browser and Variant Annotation Integrator. 1
18:22, 31 October 2017 GenomeInformatics2017.pdf (file) 1.4 MB AngieHinrichs Poster (36"x42") presented at Genome Informatics 2017 about support for HGVS terms in the Genome Browser and Variant Annotation Integrator 1
22:10, 28 September 2017 GenbankPrimates.jpg (file) 113 KB Hiram primate phylogenetic tree from genbank taxIds Given a set of taxon IDs, utilizing [http://phylot.biobyte.de/ phylot.biobyte.de] to derive this phylogenetic tree. NOTE: not necessarily completely accurate. Image drawn by [http://itol.embl.de/ itol.embl. 1
18:17, 2 June 2017 Btrfs filesystem readWrite performance.png (file) 120 KB Hiram read/write performance test results for 'btrfs' filesystem 1
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